DelaySim: Delay Stochastic Simulation Algorithms
A Java library to perform stochastic simulation of biological systems with delays. This software has been developed to perform simulations described in the Ph.D. thesis “Formal Modeling and Simulation of Biological Systems With Delays” by Giulio Caravagna. This software is released under the terms of the GNU GPL license.
The thesis can be found here.
Download DelaySim (zip archive)