Papers
D. Cangelosi. An Adaptive Tau Leaping Method for Non Stiff Chemical Reacting Systems To submit to IET Systems Biology"
D. Cangelosi, D. Chiarugi, G. Cercignani, N. Deiana, S. Fabbiano, C. Felicioli, L. Freschi, L. Fulgentini, R. Marangoni and L. Sabina Photoperception in Halobacterium salinarium: a Systems Biology Approach. To submit to PLoS Computational Biology
D. Cangelosi, S. Fabbiano, C. Felicioli, L. Freschi and R. Marangoni QDC (Quick Direct-method Controlled): a simulator of metabolic experiments. Submitted to IET Systems Biology
SSALeaping: Efficient leap condition based direct method variant for the stochastic simulation of chemical reacting system. In SIMUTools ’10: Proceedings of the 3rd International ICST Conference on Simulation Tools and Techniques, pages 1–10. ICST (Institute for Computer Sciences, Social-Informatics and Telecommunications Engineering), 2010.
G. Battaglia, D. Cangelosi, R. Grossi and N. Pisanti Masking patterns in sequences: A new class of motif discovery with don’t cares. Theor. Comput. Sci., 410(43):4327–4340, 2009.
C. Dittamo and D. Cangelosi Optimized Parallel Implementation of Gillespie’s First Reaction Method on Graphics Processing Units. International Conference on Computer Modeling and Simulation, ICCMS 2009, Macau, China, 20-22 February 2009. IEEE, 2009.