Aureliano Rama

Ph.D. student in Computer Science at Dipartimento di Informatica, Università di Pisa

Research group on Modelling, Simulation and Verification of Biological Systems

Teaching Assistant:

Atehist :

UAAR Member #8995
Atheist OUT of the closet
One of The Brights
Pastafarian: follower of the Church of the Flying Spaghetti Monster

and :

Subscriber of Il Fatto Quotidiano, one of the (very) few free press newspapers in Italy
C++, C#, Python, PHP and Java Developer with Notepad++
Listener and Supporter of KOQX Blues Radio

See all my links below

Contact Information

Dipartimento di Informatica
Università di Pisa
Largo B. Pontecorvo, 3
56127 Pisa, Italy

Room: 339
E-mail: click here and solve the reCaptcha to see my email address
Phone: +39 050 221 3160

Publications

COPYRIGHT: Most of the papers available from this page are draft version of papers appeared in print, whose copyright is held by the publisher. While the papers can be used for personal use, redistribution or reprinting for commercial purposes is prohibited. As regards papers published by Springer and Elsevier, the original publications are available at www.springerlink.com and www.sciencedirect.com, respectively.

BibTEX File: bibtex-rama.txt

Papers

Roberto Barbuti, Daniela Lepri, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini, and Aureliano Rama
"Simulation of Kohn's Molecular Interaction Maps Through Translation into Stochastic CLS+" [pdf]
in PSI 2009 Proceedings, LNCS 5947, 2010

Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini, and Aureliano Rama
"A Process Calculus for Molecular Interaction Maps" [pdf]
in MeCBIC 2009 Proceedings, Electronic Proceedings in Theoretical Computer Science 11, EPTCS-11, 2009

Thesis and Proposals

Aureliano Rama
"Autonomous Interactive Agents for Population Ecology" [pdf]
Doctoral Thesis Proposal, April, 14th 2010

Aureliano Rama
"The Calculus of Molecular Interaction Maps" [pdf]
Master Thesis, Department of Computer Science, University of Pisa, 2008
Advisors: Prof. Roberto Barbuti, Dott. Giovanni Pardini

Aureliano Rama
"Confronto di database XML" ~~[pdf]~~
Bachelor Thesis, Department of Computer Science, University of Pisa, 2003
Advisors: Prof. G. Ghelli

Citations

DBLP: Aureliano Rama

Conference Slides

Roberto Barbuti, Daniela Lepri, Andrea Maggiolo-Schettini, Paolo Milazzo, Giovanni Pardini, and Aureliano Rama
"Simulation of Kohn's Molecular Interaction Maps Through Translation into Stochastic CLS+" [pdf]
in Seventh International Andrei Ershov Memorial Conference "PERSPECTIVES OF SYSTEM INFORMATICS", Novosibirsk, Russia
PSI '09 Homepage

Marco A.L. Zuffi, Aureliano Rama, Paolo Milazzo, Andrea Maggiolo Schettini, Roberto Barbuti
"Headstarting in the European pond turtle, Emys orbicularis: a computational approach and a proposed model for management plans" [zipped ppt]
in Seventh Annual TSA Symposium on Conservation and Biology of Tortoises and Freshwater Turtles", St. Louis, Missouri
Turtle Survival Alliance

Seminar Slides

Aureliano Rama
"Formalism for Ecology Applications" [pdf]
in 2012 Ph.D. Workshop (Program of the day)

Aureliano Rama
"Mixed sexual and asexual reproduction strategies in a fluctuating environment" [pdf]
in Weekly Seminars, Institute of Zoology, University of Graz (Austria)

Aureliano Rama
"Ph.D. Advancement: Formalism for Ecology Applications" [pdf]

Aureliano Rama
"Evolving Cellular Automata with Genetic Algorithms" [pdf]
in Barbuti, Maggiolo: Bio-inspired models of computation
Seminar Cycle Homepage

Aureliano Rama
"Doctoral Thesis Proposal: Autonomous Interactive Agents for Population Ecology" [pdf]

Software

Emys Simulator: a simple, straightforward and fast ad-hoc simulator modelling large populations of European Pond Turtle (Emys Orbicularis)
(Released under GNU GPL v2.0)